Browse of TCMCG021C22017 protein

CDS

Accession Number	TCMCG021C22017
gbkey	CDS
Protein Id	XP_010934559.1
Location	join(37148266..37148434,37148540..37148751,37150660..37150800,37151032..37151208,37154691..37154787,37155091..37155203,37155319..37155441,37155538..37155609,37156973..37157065,37157477..37157590,37157700..37157822,37160033..37160218,37160362..37160436,37160623..37160759,37162509..37162643,37163430..37163581,37163670..37163735,37171591..37171697,37171943..37172023,37172109..37172183,37172265..37172366,37176065..37176233,37176329..37176462,37176688..37176771,37176880..37176980,37179874..37180027,37180125..37180199,37180301..37180454,37181125..37181770,37183171..37183231,37187385..37187530,37187611..37187794,37187871..37187969,37188157..37188539,37188635..37188811,37192172..37192268,37192342..37192497,37192565..37192795,37192884..37192967,37194331..37194438)
Gene	LOC105054684
GeneID	105054684
Organism	Elaeis guineensis

Protein

Length	1930aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA268357
db_source	XM_010936257.3
Definition	rRNA biogenesis protein RRP5 isoform X1 [Elaeis guineensis]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGCTCTCACTGAGAAGAAGGCGCCCCAGAGGAAGCGGCCCATCAACGGAACGAAACCCCACAAGACCTTCAAGAAGCCGAGAAAGGATAAGACACGCCCCCCGGCTCCATCGGAGCTGCCCTCTTCCCTCCTCGTTCAAGACGACGATCCTGATTTCCCTAGAGGAGGAGCGAGCGTTCTTACTCGGGAGGAGATAGCAGAGGCTCGAGCGGAGGCCGAAGAGGAGTTTGAGAGGGAGTCCAAGAAGAGCAAGGACACAAGGAAGAACAAAGGGGCCCAGAAGTCGTTGGCTGAAGCCGTGGATGATTTTGGATCACTTTTTGGCGATGGCGTGACCGGGAAGCTACCTAGGTTTGCCAACCGCATCACGTTGAAGAATATTTCACCAAGAATGAAGCTTTGGGGAGTCATCATTGAAGTAAACACAAAAGATCTTGTAATTGGTCTTCCAGGGGGGCTAAGAGGATATGTTCGTGCAGAAGAAGTGTCTGACATTATTATAGATGATGGAAACAAGGATTCTGAAAGTAATTTGCTTTGTAGCATATTCCATGTCGGGCAGCTTGTTTCTTGCATAGTGGTACGGGTGGATGATGATAAGAAAGATGGAAAGGGCAACAGAAGAATTTGGCTGTCACTTCGCCTTAGTTTGCTGTACAAGGGCCTTATGTTGGATGCTGTTCAAGATGGCATGGTTCTGACTGCACAAATAAAGAGTATTGAAGACCGTGGTTATATTCTTTACTTCGGAGTGTCATCTTTTACTGGTTTTTTGCCAAAGAGTGAACAAGATGGTGGCGTATTTAGTAGTGGACAACATTTACAATGTGTTGTCAAAAGTATAGATAAAGCTCGAGCTGTTGCTATTGTGAATTCTGATGCCGATTTGGTGTCTAAAAGTGCTATGAAAGATCTAAAAGGACTCTCGATTGACCTTTTGGTTCCTGGCATGATGGTTAATGCTCGTGTCCACTCTACCCTTGAGAATGGAATTATGCTGTCATTCCTCACTTATTTTACTGGAACAGTAGATATTTTCCATCTGCAAAACTCCTTCTCCCATGCAACTTGGAAAGATCACTACAATCAGAATAAGAAGGTGAATGCTCGGATATTATTTATTGATCCATCAACTAGAGCTGTTGGGCTGACCTTGAATCCTTACCTTGTTCAAAATAAGGCTCCTCCTTCTATTGTCAGAACTGGAGAAATTTATGATAATTCACGAATTTTAAGGGTTGATAGAGGGATTGGTCTTCTTCTTGAAGTACCTTCTTCTCCAATTCCTTCACCTGCATTTGTCAGTATATCTGATGTTTCTGATGAAAAAGTTACAAAGCTAGAAAAAAAGTTCAAGGAAGGAGATTATGTTCGTGTTCGTGTTCTTGGAATGAGACATTTAGATGGACTAGCAATGGGCACCTTAAGGGCTAGTGCTTTGGAAGGGTCGGTTTTCACTCATTCAGATGTCAAGCCTGGAATGTTGGTCAAAGCTAAGGTTATTGCTGCGGAAAATTTTGGTGCTATTGTCCAATTTTCTGGTGGTGTGAAAGCTCTTTGCCCCCTTCAACACATGTCAGAGTTGGACATTCTAAAGCCTCCCAAGAAGTTTAAGGTTGGATCTGAGTTGCGGTTTCGTGTGCTGGGTTGCAAATCCAAGAGAATAACTGTCACATACAAGAAAACTCTAGTTAAATCAAGGCTGCCTGTGCTTGCTTCATATGCTGATGCTACTGAAGGATTAATTGTGCATGGATGGATAACTAAAATTGAAAAGCATGGTTGCTTTGTGAGGTTTTACAATGGAGTTCATGGTTTTGCACAAAGATCAGAGCTTGGATTGGAACCAGGAAGTGAGGCAGATGCTGCATATCATGTTGGACAGGCGGTCAAATGTAGGGTAATTAGTTCAGCTCCAGCTTCGCGAAGAATCAGCATTAGTTTTGTTATATCTCCCAAAAGTGGCAGGAGTTCTGAGAATGACGTTGCCAAGTTGGGTAGTATTGTTTCTGGTGTTGTTGAGCGACTTACGCCTGCAGCAGTTATTATCCATGTGAATGGAAATGCTTATTTGAAAGGGACATTATTTGATGAGCATTTAGCAGATCACCAGGGGCAAGCCGTTCTTTTGAAATCTTTATTGAGACCTGGATATCAGTTTGATCAGCTTTTGGTGCTAGATACTGAAGGCCAGAACTTAATTCTTTCAGCAAAGTACTCTCTTATTAATTATGCCAAAGAGATACCTTCAGATCTTTCACAAATTCATCCCTTATCTGTAGTCAATGGATATATCTGCAATATAATTGAAAATGGCTGCTTTGTTCGTTTTCTGGGACGTTTGACTGGATTCTCTCCAAAAGATAAAGTTACCGATCAACAAATCGATAATTTATTGGATGCATTCTATGTTGGACAATCAGTTCGTAGTCACGTCCTCACTTTTAATGGTGAAACTGGTCGGCTTAAACTATCCTTGAAGCAGTCTTTATGTTCCTCATCAGATGTTTCATTTATTCAAGGATATTTTCTTCTGGAGGATAAGATAGCAGCATTGCAGATGTCAGATGCCAATAATTCTGATTCAAGTTGGACGAGAAGCTTCAGCATTGGCAGTTTGGTTGAGGGAGAGATTCAGGAAATAAAAGAATTTGGTGTTGTTGTTAGCTTCAGAGATCATGGTGATGTTGTTGGGTTTGTTACACATCATCAATCTGGTGGAGTTAATGTGGAAGTGGGATCTGTTGTTAAAGCTTTGGTTCTGGATATAGCTAAGTCAGATGGCCTTGTTGATTTATCCCTTAAATCGGAGCTGGTGACAAGTGCTTGTGTAGATGGAGCTAAGAAGAAGCGATGTCGAAGTACATCTACGGACTTGCAGCTGCACCAAACAGTAAATGGTGTGGTGGAGATTGTGAAAGAAAATTATTTGGTTCTTTCGATTCCGGAGTATAATTACGCTATAGGATATGCATCAATAACTGACTATAACATGCAAAAGCTTCCTCGCAAGCACTTCTTGAATGGACAAAGTGTCCTTGTGACTGTTGGGGTACTTCCAAGCTCATGTTCTTCTGGAAGACTGTTGCTGCTTCTTAAATCTGCGGGTGACGTTTCTGAGACTTCTAGATCTAAAAGGGCCAGAAAAATGTCTAGCTACACAGTGGGCTCGCTTGTTGTGGGGGAGATTATTGACATAAAGCCTCTTGAACTTATTTTGAAATTTGGGACCGGGTTTCGTGGGAGAATTCATATAACCGAGGTATTCGACAATAATCATGCTCCAGAGAATCCATTCAGTAAATTTAAAATTGGACAATTGCTTGATGCACGGATAGTTGCGAAGCTTGAGCAGTCAGGGAAGAGTGGAAAAGGGTATCAATGGGAGCTGTCGGTTAGACCCTCTCTGCTTACAGGAGAATCAATGAAAATTCCCACTGCCGAGGAGTTCAATTTTTCAGTGGGCAGCATTGTCCGAGGTTATGTTGTTAAGGTGGATGGTGAGTGGGTCTGGTTAACCGTGTCTCGATCCGTCATGTCTCATATTTTTGTCCTTGATAGTTCTTGTGAACCTGGTGAGCTTCAAGAATTTCAGCAGCGGTACAGTGTGGGTCAAGCTGTCAAAGGCAAAATCATTAGCATAAATAAAGAGAAAAAGCTGTTGAGGTTAGCATCATGCCCATCTTCTTCTGTTTCTGGGTCATCGGTTGATCATGAAATTGTGAAGGTAGACATTCAAGAAAATAAAGTTTCTAATGTGGATTGTGCTGAGCACATTATACGAGGTGACATTGTTGGTGGTAAAGTCAAAAGAATCCTTCCTGGTGTTAGTGGGCTGCTTGTGCAGATTGGGCCTCATCTTTTTGGAAAGGCTCATTATACTGAACTTATAGATACATGGGTTCCTCAACCCCTATGTGGATATCATGAAGGACAATTTGTCAAATGTAAGATCCTGGAAATAACTCGTTCGTTGGAGGGAACTTTACATGTTGATCTGTCTCTACGTTCTTCATTACAAGACATCCAATCAGTTGATTCCACAGTGCTCGACAACAATCTGAATACTCACATCCAGCGGTTTGAAAAGATTGAAGATCTTCATCCTAACATGGATGTGCAGGGATATGTCAAGAATGTAACTTCAAAAGGATGTTTCATTATGCTGTCTCGAATGATTGATGCTAGAATCCTCCTATCAAACTTGTCTGATGGATACATTGAAAATCCTGAAAAAGAGTTTCCAGCTGGAAAGCTTGTACATGGCAGGGTTTTATCTGTGGATCCTGCATCGAAGAGAGTTGAGGTGACATTGAAGACGGAAATGAAGACCGAGGTAGCAAAATCCGATGCCAGTGTTTTTTGTAATCTACATGTCGGTGATGTTATTTCTGGCCAGATTAGACGGATTGAGCCATATGGCCTGTTTATAGCAATTGATAACACCAATGTGGTTGGTTTATGTCATAAATCTGAACTTTCAGATGAGCCCATCGATAACATTGAAACTAGATATAAAGCAGGTGATAGAGTTGTTGCAAAAGTTTTGAAGGTTGATGAGGAAAGACATCGAATATCCCTTGGCATGAAGAAATCTTACATTGGAAATGCCAGCGATGCTCCTATCATCTCACGTCATGGTACAGCTGATGGCAGTTTTGATGGTATTTCTACTGTGGATGATACATTGCTTGCTTTGCAGCAGAATGATGACCTACCCCATGCTGAAAGGATGTTTGGGTGTGATAATGAGGCCTGTGCAGTTCTCGAACCAGCAGAAACAAGGGCTTCTGTTCTTCCTCTTCAGGTTGTTCTTGATGACTCAGATGGTTCTGATTTGGATAATGTAACTGTAAGCCAGGAAATTGTCAATTTGACCGATATGGCTGCAAAAAAGAGTGATAGACGCACGAAGAAAAAAGCCAAGGAGGAAAGGGAGCTAGAAATCAGTGCTTCTGAGGAGAGGAATCTACAGAAGGATATACCAAAGACAGCAGATGAATTTGAGAAATTGGTCAGAAGTTCTCCTAACAGTAGTTTTGTCTGGATAAAGTACATGGCTTTCATGTTATCTCTTGCAGATGTTGAAAAAGCACGCTCCATTGCAGAAAGGGCTCTGAGAACAATAAACATCAGAGAGGAAGGGGAAAAGCTTAATATTTGGGTCGCATGTTTTAATCTAGAGAATGAATATGGAAGTCCACCAGAGGAGGCTGTTAAGAAAACCTTCCAGAGAGCATTGCAGTATTGCGATCCCAAAAAATTGTATCTAGCTCTTCTGGGAATGTATGAAAGGACCGAACAACACAAACTAGCAGATGAGCTTCTGGAGAGAATGACCAAAAAGTTCAAAAACTCATGCAAGGTTTGGCTACACTGTGTTCAAAGCTTCCTGAAGCAAGACAAGGATGGAATTCAATCTCTTGTAAACCGTGCTCTTCTGAGTCTGTCACGCAACAAGCATATTAAATTCATTTCACAGACTGCTATCCTAGAATTCAAGTTTGGTGTGCCTGATAGAGGACGATCTATGTTTGAAGGTATATTGCGAGAGTATCCCAAGAGAACAGATCTTTGGAGCATATACCTCGATCAAGAAATTCGCCTGGGTGACGTGGAAGTGATACGTGCATTATTTGAGAGAGCAACATTTCTGAGTCTTCCACCAAAAAAAATGAAGTTCTTGTTTAAGAAGTATCTGGAGTATGAGAAGGCTCATGGTGATGAAGACAGGATAGAGCACGTTAAAAAGAGAGCTTTGGAGTATGTGGAGAGCTCGCTTGCTTGA

Protein:   MAALTEKKAPQRKRPINGTKPHKTFKKPRKDKTRPPAPSELPSSLLVQDDDPDFPRGGASVLTREEIAEARAEAEEEFERESKKSKDTRKNKGAQKSLAEAVDDFGSLFGDGVTGKLPRFANRITLKNISPRMKLWGVIIEVNTKDLVIGLPGGLRGYVRAEEVSDIIIDDGNKDSESNLLCSIFHVGQLVSCIVVRVDDDKKDGKGNRRIWLSLRLSLLYKGLMLDAVQDGMVLTAQIKSIEDRGYILYFGVSSFTGFLPKSEQDGGVFSSGQHLQCVVKSIDKARAVAIVNSDADLVSKSAMKDLKGLSIDLLVPGMMVNARVHSTLENGIMLSFLTYFTGTVDIFHLQNSFSHATWKDHYNQNKKVNARILFIDPSTRAVGLTLNPYLVQNKAPPSIVRTGEIYDNSRILRVDRGIGLLLEVPSSPIPSPAFVSISDVSDEKVTKLEKKFKEGDYVRVRVLGMRHLDGLAMGTLRASALEGSVFTHSDVKPGMLVKAKVIAAENFGAIVQFSGGVKALCPLQHMSELDILKPPKKFKVGSELRFRVLGCKSKRITVTYKKTLVKSRLPVLASYADATEGLIVHGWITKIEKHGCFVRFYNGVHGFAQRSELGLEPGSEADAAYHVGQAVKCRVISSAPASRRISISFVISPKSGRSSENDVAKLGSIVSGVVERLTPAAVIIHVNGNAYLKGTLFDEHLADHQGQAVLLKSLLRPGYQFDQLLVLDTEGQNLILSAKYSLINYAKEIPSDLSQIHPLSVVNGYICNIIENGCFVRFLGRLTGFSPKDKVTDQQIDNLLDAFYVGQSVRSHVLTFNGETGRLKLSLKQSLCSSSDVSFIQGYFLLEDKIAALQMSDANNSDSSWTRSFSIGSLVEGEIQEIKEFGVVVSFRDHGDVVGFVTHHQSGGVNVEVGSVVKALVLDIAKSDGLVDLSLKSELVTSACVDGAKKKRCRSTSTDLQLHQTVNGVVEIVKENYLVLSIPEYNYAIGYASITDYNMQKLPRKHFLNGQSVLVTVGVLPSSCSSGRLLLLLKSAGDVSETSRSKRARKMSSYTVGSLVVGEIIDIKPLELILKFGTGFRGRIHITEVFDNNHAPENPFSKFKIGQLLDARIVAKLEQSGKSGKGYQWELSVRPSLLTGESMKIPTAEEFNFSVGSIVRGYVVKVDGEWVWLTVSRSVMSHIFVLDSSCEPGELQEFQQRYSVGQAVKGKIISINKEKKLLRLASCPSSSVSGSSVDHEIVKVDIQENKVSNVDCAEHIIRGDIVGGKVKRILPGVSGLLVQIGPHLFGKAHYTELIDTWVPQPLCGYHEGQFVKCKILEITRSLEGTLHVDLSLRSSLQDIQSVDSTVLDNNLNTHIQRFEKIEDLHPNMDVQGYVKNVTSKGCFIMLSRMIDARILLSNLSDGYIENPEKEFPAGKLVHGRVLSVDPASKRVEVTLKTEMKTEVAKSDASVFCNLHVGDVISGQIRRIEPYGLFIAIDNTNVVGLCHKSELSDEPIDNIETRYKAGDRVVAKVLKVDEERHRISLGMKKSYIGNASDAPIISRHGTADGSFDGISTVDDTLLALQQNDDLPHAERMFGCDNEACAVLEPAETRASVLPLQVVLDDSDGSDLDNVTVSQEIVNLTDMAAKKSDRRTKKKAKEERELEISASEERNLQKDIPKTADEFEKLVRSSPNSSFVWIKYMAFMLSLADVEKARSIAERALRTINIREEGEKLNIWVACFNLENEYGSPPEEAVKKTFQRALQYCDPKKLYLALLGMYERTEQHKLADELLERMTKKFKNSCKVWLHCVQSFLKQDKDGIQSLVNRALLSLSRNKHIKFISQTAILEFKFGVPDRGRSMFEGILREYPKRTDLWSIYLDQEIRLGDVEVIRALFERATFLSLPPKKMKFLFKKYLEYEKAHGDEDRIEHVKKRALEYVESSLA